Start your day with these delicious and easy-to-make breakfast egg muffins. Packed with bell peppers, onions, and shredded cheese, these muffins are perfect for a quick, nutritious breakfast on the go. They are also great for meal prepping, ensuring you have a healthy option ready throughout the week.
Most of the ingredients in this recipe are commonly found in your kitchen. However, if you don't usually keep bell peppers or shredded cheese on hand, you might need to pick them up at the supermarket. Look for fresh, vibrant bell peppers and a good quality shredded cheese to enhance the flavor of your muffins.

Ingredients For Breakfast Egg Muffins Recipe
Eggs: The base of the muffins, providing protein and structure.
Milk: Adds creaminess and helps to blend the ingredients.
Bell peppers: Adds a sweet, crunchy texture and vibrant color.
Onions: Provides a savory depth of flavor.
Shredded cheese: Melts into the muffins, adding richness and a gooey texture.
Salt: Enhances the overall flavor of the muffins.
Pepper: Adds a touch of heat and balances the flavors.
Technique Tip for Making Egg Muffins
To ensure your egg muffins come out fluffy and well-cooked, avoid overmixing the egg mixture. Overmixing can incorporate too much air, leading to a denser texture. Instead, gently whisk the eggs and milk until just combined. Additionally, finely dice the bell peppers and onions to ensure even distribution and consistent cooking throughout the muffins.
Suggested Side Dishes
Alternative Ingredients
eggs - Substitute with egg whites: For a lower cholesterol option, use egg whites instead of whole eggs.
eggs - Substitute with flaxseed meal and water mixture: For a vegan alternative, mix 1 tablespoon of flaxseed meal with 2.5 tablespoons of water per egg.
milk - Substitute with almond milk: For a dairy-free option, use almond milk which has a similar consistency.
milk - Substitute with coconut milk: Adds a slight coconut flavor and is also dairy-free.
diced bell peppers - Substitute with diced zucchini: Zucchini provides a similar texture and can be a good alternative if you want a different flavor.
diced bell peppers - Substitute with diced tomatoes: Tomatoes add a juicy texture and a slightly tangy flavor.
diced onions - Substitute with green onions: Green onions offer a milder flavor and a bit of color.
diced onions - Substitute with shallots: Shallots provide a sweeter and more delicate flavor compared to regular onions.
shredded cheese - Substitute with nutritional yeast: For a vegan option, nutritional yeast provides a cheesy flavor without dairy.
shredded cheese - Substitute with vegan cheese: Vegan cheese can be used for a dairy-free alternative that melts similarly to regular cheese.
salt - Substitute with soy sauce: Soy sauce can add a salty and umami flavor, but use less to avoid overpowering the dish.
pepper - Substitute with cayenne pepper: For a spicier kick, use cayenne pepper instead of black pepper.
Other Alternative Recipes Similar to Egg Muffins
How to Store or Freeze Your Egg Muffins
Allow the breakfast egg muffins to cool completely at room temperature before storing. This helps prevent condensation, which can make them soggy.
For short-term storage, place the cooled muffins in an airtight container. Line the container with a paper towel to absorb any excess moisture. Store in the refrigerator for up to 4 days.
If you plan to freeze the muffins, wrap each one individually in plastic wrap or aluminum foil. This helps to maintain their freshness and prevents freezer burn.
Place the wrapped muffins in a large freezer-safe zip-top bag or an airtight container. Label the bag or container with the date to keep track of their freshness.
When you're ready to enjoy a frozen muffin, remove it from the freezer and unwrap it. Reheat in the microwave for about 30-60 seconds, or until heated through. Alternatively, you can reheat them in a preheated oven at 350°F (175°C) for 10-15 minutes.
For added convenience, consider portioning out the muffins into individual servings before freezing. This makes it easy to grab a quick breakfast on busy mornings.
To maintain the best texture and flavor, consume the frozen muffins within 2-3 months.
How to Reheat Leftovers
Oven Method: Preheat your oven to 350°F (175°C). Place the breakfast egg muffins on a baking sheet and cover them with aluminum foil to prevent them from drying out. Heat for about 10-15 minutes or until warmed through.
Microwave Method: Place a breakfast egg muffin on a microwave-safe plate. Cover it with a damp paper towel to retain moisture. Microwave on high for about 30-45 seconds. If it's not warm enough, continue to heat in 10-second intervals.
Toaster Oven Method: Preheat your toaster oven to 350°F (175°C). Place the breakfast egg muffins on the toaster oven tray. Heat for about 10 minutes or until they are warmed through.
Stovetop Method: Heat a non-stick skillet over medium-low heat. Add a small amount of olive oil or butter to the pan. Place the breakfast egg muffins in the skillet and cover with a lid. Heat for about 5-7 minutes, flipping halfway through, until they are warmed through.
Air Fryer Method: Preheat your air fryer to 300°F (150°C). Place the breakfast egg muffins in the air fryer basket. Heat for about 5-7 minutes or until they are warmed through.
Best Tools for Making Egg Muffins
Oven: To preheat and bake the egg muffins at 375°F (190°C).
Mixing bowl: To whisk together the eggs, milk, and other ingredients.
Whisk: To blend the eggs and milk thoroughly.
Knife: To dice the bell peppers and onions.
Cutting board: To provide a surface for dicing the vegetables.
Measuring cups: To measure out the milk, bell peppers, and onions accurately.
Muffin tin: To pour the egg mixture into and bake the muffins.
Cooking spray: To grease the muffin tin and prevent the muffins from sticking.
Oven mitts: To safely remove the hot muffin tin from the oven.
Cooling rack: To let the muffins cool for a few minutes before serving.
How to Save Time on Making Egg Muffins
Prep ingredients ahead: Dice the bell peppers and onions the night before and store them in the fridge.
Use pre-shredded cheese: Save time by using pre-shredded cheese instead of shredding it yourself.
Batch cooking: Double the recipe and freeze the extra egg muffins for quick breakfasts later.
Non-stick spray: Use non-stick spray on the muffin tin for easy cleanup.
Quick whisking: Use a hand mixer to whisk the eggs and milk faster.

Breakfast Egg Muffins Recipe
Ingredients
Main Ingredients
- 6 Eggs
- ¼ cup Milk
- ½ cup Diced bell peppers
- ½ cup Diced onions
- ½ cup Shredded cheese
- to taste Salt and pepper
Instructions
- Preheat your oven to 375°F (190°C).
- In a mixing bowl, whisk together the eggs and milk.
- Add the diced bell peppers, onions, and shredded cheese to the egg mixture. Season with salt and pepper to taste.
- Pour the mixture evenly into a greased muffin tin.
- Bake for 20 minutes or until the muffins are set and slightly golden on top.
- Let them cool for a few minutes before removing from the tin. Serve warm.
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